Our paper entitled “The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping” has been accepted for publication in Radiology. It is the result of a large collaboration of researchers grouped under the name of Image Biomarker Standardization Initiative (IBSI), working towards standardizing the extraction of image biomarkers for radiomics studies.
Valentin Oreiller successfully passed his mid-thesis exam at the UNIL FBM quantitative biology doctoral school. Congratulations! His thesis is co-supervised by Prof. Adrien Depeursinge and Prof. John O. Prior.
The paper “Integrating radiomics into holomics for personalised oncology: from algorithms to bedside” by Roberto Gatta, Adrien Depeursinge, Osman Ratib, Olivier Michielin, and Antoine Leimgruber has been accepted for publication in European Radiology Experimental.
This work is the result of a collaboration between CHUV, HES-SO, and the Riviera-Chablais Hospital.
The full text is now available online at this link.
The paper on “Gaze, behavioral, and clinical data for phantom limbs after hand amputation from 15 amputees and 29 controls”, by Gianluca Saetta, Matteo Cognolato, Manfredo Atzori, Diego Faccio, Katia Giacomino, Anne-Gabrielle Mittaz Hager, Cesare Tiengo, Franco Bassetto, Henning Müller, Peter Brugger, has been accepted in Scientific Data and is now available online here.
The paper entitled “Gaze, visual, myoelectric, and inertial data of grasps for intelligent prosthetics“, by Matteo Cognolato, Arjan Gijsberts, Valentina Gregori, Gianluca Saetta, Katia Giacomino, Anne-Gabrielle Mittaz Hager, Andrea Gigli, Diego Faccio, Cesare Tiengo, Franco Bassetto, Barbara Caputo, Peter Brugger, Manfredo Atzori and Henning Müller has been accepted and published in Scientific Data, a journal from the publishers of Nature.
Don’t miss our new Medium publication page. You can find there technical tutorials, stories and insights on our research focus, and updates from conferences.
Some of our latest posts are:
How docker changed my life: deploying machine learning has never been this easy!
A simple formula for complex research: how to explain the role of AI to non- geeks
The prosthesis that everybody wants: working with amputees to design inexpensive prosthetic hands that work well
Cristina Simon-Martinez has been awarded a prestigious Individual Fellowship of the Marie Curie Actions, funded by the European Union, for the project Optimizing Vision reHABilition with virtual-reality games in pediatric amblyopia (V-HAB). The grant lasts for 2 years and offers exciting new learning opportunities, also contributing to the training, networking and research costs of the fellow. With this grant, Cristina will study the impact of vision deficits on cognition and motor control in children with pediatric amblyopia and will use virtual reality as a means to reduce those deficits.
Our Scientific Data article on “A large calibrated database of hand movements and grasps kinematics“, by Néstor J. Jarque-Bou, Manfredo Atzori and Henning Müller is now available here.
Vincent Andrearczyk presented our work on exploiting images from public biomedical literature for machine learning at the 26th international conference on MultiMedia Modelling (MMM2020) in Daejeon, Korea.
Full details of the paper: “Studying Public Medical Images from the Open Access Literature and Social Networks for Model Training and Knowledge Extraction” by Henning Müller, Vincent Andrearczyk, Oscar Jimenez del Toro, Anjani Dhrangadhariya, Roger Schaer and Manfredo Atzori.
The paper entitled “A large calibrated database of hand movements and grasps kinematics“, by Néstor Jarque-Bou, Manfredo Atzori, and Henning Müller, has been accepted for publication in Scientific Data, a journal from the publishers of Nature. The manuscript will soon be available online.
Prof. Henning Müller gave invited talks at the Conference on Artificial Intelligence in Medical Imaging, Tehran, Nov. 2-5 2019.
He gave a presentation on “Creating an AI ecosystem for multimodal data analysis in the MedGIFT group” and an overview of the VISCERAL benchmarks on intelligent medical data analysis.
Valentin Oreiller gave an invited talk on “Learning with less data: Parametric and Locally Rotation Invariant CNNs” at the Workshop on Machine Learning in Radiology 2019 in CHUV (Centre Hospitalier Universaire Vaudois), Lausanne.
This workshop, co-organized by CHUV Department of Radiology and Siemens Healthineers Advanced Clinical Imaging Technology, gathered national and international researchers for discussions and talks on the use of machine learning with radiology data, and how these techniques can benefit clinical practice.
Prof. Henning Müller is joining the editorial board of Scientific Data, a data-focused journal from the publishers of Nature.
Scientific Data is a peer-reviewed open-access journal focusing on descriptions of data sets relevant to the natural sciences, which are provided as machine-readable data, complemented with a human-oriented narrative.
Four papers have been accepted for oral presentations at the 2020 SPIE Medical Imaging conference which will be held in Houston, Texas, 15 – 20 February 2020.
“Exploiting the PubMed central repository to mine out a large multimodal dataset of rare cancer studies” by Anjani K. Dhrangadhariya, Oscar Jimenez-del-Toro, Vincent Andrearczyk, Manfredo Atzori and Henning Müller, in the Imaging Informatics for Healthcare, Research, and Applications track.
“A systematic comparison of deep learning strategies for weakly supervised Gleason grading” by Sebastian Otálora, Oscar Jimenez-del-Toro, Manfredo Atzori, Amjad Khan, Vincent Andrearczyk and Henning Müller, in the Digital Pathology track.
“An exploration of uncertainty information for segmentation quality assessment” by Katharina Hoebel, Vincent Andrearczyk, Andrew L. Beers, Jay B. Patel, Ken Chang, Adrien Depeursinge, Henning Müller and Jayashree Kalpathy-Cramer, in the Image Processing track.
“Generalizing convolution neural networks on stain color heterogeneous data for computational pathology”, by Amjad Khan, Manfredo Atzori, Sebastian Otálora, Vincent Andrearczyk and Henning Müller, in the Digital Pathology track.
The paper entitled “Texture-driven parametric snakes for semi-automatic image segmentation” by Anaïs Badoual, Michael Unser and Adrien Depeursinge has been accepted for publication in Computer Vision and Image Understanding (CVIU).
Nora’s presentation Educational Outcomes Depend Both on Visual and Multisensory Control of Selective Attention has been selected as a flash talk for the 1st Annual Meeting of the Swiss Society of the Early Childhood Research, taking place on 18th of November 2019 in Lausanne.
23rd September: Paul gave an invited talk “Bridging past and future in education” at the Development-Neuroscience-Cognition section of Psychology Dept of UZH by invitation of Pr. Nora Raschle: https://www.psychologie.uzh.ch/de/studium/bscmsc/master/kolloquien/denc.html